An efficient neuro-fuzzy based segmentation of normal tissues in brain MRI (BMRI) using extensive feature set
DOI:
https://doi.org/10.14738/jbemi.15.429Abstract
Brain tissue Segmentation from the MRI images is having significance in the medical research field. The accurate Segmentation of the normal as well as the abnormal tissues is the complex assignment in this process. In this paper, a technique named Neuro-Fuzzy Based Segmentation (NFBS) is proposed for segmenting the normal features such as White Matter (WM), Gray Matter (GM) and Cerebro-Spinal Fluid (CSF) in the MRI Brain images. (1) Feature extraction (2) Classification (3) Segmentation are the three stages offered in this work. At first, the features such as energy, entropy, homogeneity, contrast and correlation from MRI Brain Images are extracted. Next, by utilizing Neuro-Fuzzy classifier, the Classification process is carried out and for this process, the feature set is specified as the input. From the outcome of Classification, the images are categorized into normal as well as abnormal. The further procedure Segmentation is performed according to this outcome only. The normal MRI images are segmented into normal tissues like White Matter (WM), Gray Matter (GM) and Cerebro-Spinal Fluid (CSF). All the tissues are individually segmented by special methods such as Gradient method, Orthogonal Polynomial Transform method. Utilizing MATLAB platform, the implementation of the proposed technique is made. The experimentation is carried out on the MRI Brain Images by BrainWeb data sets. The performance of the proposed technique is assessed with the help of the metrics namely FPR, FNR, Specificity, Sensitivity and Accuracy. Therefore, using our proposed techniques with enhanced classification, the normal tissues of MRI Brain images are segmented accurately.
References
. P. Hagmann, J.P. Thiran, L. Jonasson, “DTI mapping of human brain connectivity: statistical fibre tracking and virtual dissection”, NeuroImage, 2003.
. M.C. Davidson, K. M. Thomas. and B. J. Casey, “Imaging the developing brain with fMRI”, Mental Retardation and developmental disabilities research reviews, 2003.
. V. A. Grau, U. J. Mewes, M. Alcaniz, ”Improved watershed transform for medical image segmentation using prior information”, IEEE Trans. on Medical Imaging, 2004, 23(4): 447-458
. H Lv., K. H. Yuan, S. L. Bao, “An eSnake model for medical imaging segmentation”, Progress in Natural Science, 2005.
. D. L. Pham and J. L. Prince, “Adaptive fuzzy segmentation of magnetic resonance images,” IEEE Trans. Med. Imag., 1999.
. A. F. Goldszal, C. Davatzikos, D. L. Pham, M. X. H. Yan, et al, “An image processing system for qualitative and quantitative volumetric analysis of brain images,” J. Comput. Assist. Tomogra., 1998.
. Arnold J.B., Liow, J.-S., Schaper, K.A., et al., “Qualitative and quantitative evaluation of six algorithms for correcting intensity nonuniformity effects”. NeuroImage, 2001.
. R. Moller., R. Zeipelt. “Automatic segmentation of 3D-MRI data using a genetic algorithm,Medical Imaging and Augmented Reality”, 2001. Proceedings. International Workshop on, 10-12 June 2001:278 – 281.
. W. M.Wells, III,W. E. L. Grimson, R. Kikinis. “Adaptive segmentation of MRI data”, IEEE Trans. Medical Imaging , 1996.
. J. C. Bezdek, L.O. Hall, L. P. Clarke, “Review of MR image segmentation techniques using pattern recognition,” Med. Phys., vol. 20, No. 4, pp. 1033-1048, 1993.
. Suetens, E. Bellon, D. Vandermeulen, M. Smet, G. Marchal, J. Nuyts, L. Mortelman, “Image segmentation: methods and applications in diagnostic radiology and nuclear medicine,” European Journal of Radiology, vol. 17, pp. 14-21, 1993.
. A. Goshtasby, D. A. Turner, “Segmentation of Cardiac Cine MR Images for extraction of right and left ventricular chambers,” IEEE sTrans. Med. Imag., vol. 14, No. 1, pp. 56-64, 1995.
. D. Brzakovic, X. M. Luo, P. Brzakovic, “An approach to automated detection of tumors in mammograms,” IEEE Trans. Med. Imag., vol. 9, No. 3, pp. 233-241, 1990.
. J. F. Brenner, J. M. Lester, W.D. Selles, “Scene segmentation in automated histopathology: techniques evolved from cytology automation,” Pattern Recognition, vol. 13, pp. 65-77, 1981.
. K. Lim, A. Pfefferbaum, “Segmentation of MR brain images into cerebrospinal fl¬uid spaces, white and gray matter,” J. Comput. Assist. Tomogr., vol. 13, pp. 588-593, 1989.
. Zhang Y, Brady M, Smith S. “Segmentation of brain MR images through a hidden Markov random field model and expectation-maximization algorithm,”. IEEE Trans Med. Imag., pp. 45–57, 2001.
. L. Lemieux, G. Hagemann, K. Krakow, and F. G. Woermann, “Fast, accurate, and reproducible automatic segmentation of the brain in T1-weighted volume MRI data, ”Magn. Reson. Med., vol. 42, pp. 127–135, 1999.
. R. Pohle and K. D. Toennies, “Segmentation of medical images using adaptive region growing,” Proc. SPIE— Med. Imag., vol. 4322, pp. 1337–1346, 2001.
. S. Shen, W Sandham, M. Grant and A. Ster, “MRI Fuzzy Segmentation of Brain Tissue Using Neighborhood Attraction with Neural Network Optimization”, IEEE Trans. On Information Technologyis Biomedicine, vol. 9, No. 3, 2005.
. Arnaldo Mayer and Hayit Greenspan, “An Adaptive Mean-Shift Framework for MRI Brain Segmentation”, IEEE Transactions On Medical Imaging, Vol. 28, No. 8, August 2009.
. Mert R. Sabuncu, B.T. Thomas Yeo, Koen Van Leemput, Bruce Fischl and Polina Golland, “A Generative Model for Image Segmentation Based on Label Fusion”, Ieee Transactions On Medical Imaging, 2009.
. Feng Shi, Yong Fan, Songyuan Tang, John H. Gilmore, Weili Lin, Dinggang Shen, “Neonatal brain image segmentation in longitudinal MRI studies”, Elsevier Inc., 2009.
. Juin-Der Lee, Hong-Ren Su, Philip E. Cheng*, Michelle Liou, John A. D. Aston, Arthur C. Tsai, and Cheng-Yu Chen, “MR Image Segmentation Using a Power Transformation Approach”, IEEE Transactions On Medical Imaging, Vol. 28, No. 6, June 2009.
. Dalila Cherifi, M.Zinelabidine Doghmane, Amine Nait-Ali , Zakia Aici,Salim Bouzelha, “Abnormal tissus extraction in MRI Brain medical images”, IEEE, 2011.
. Nagesh Vadaparthi, Srinivas Yarramalle, Suresh Varma Penumatsa, “Unsupervised Medical Image Segmentation On Brain MRI Images Using Skew Gaussian Distribution”, IEEE-International Conference on Recent Trends in Information Technology, ICRTIT 2011.
. Soumya Maitra, "Morphological Edge Detection Using Bit-Plane Decomposition in Gray Scale Images", In Proceedings of INDIACom, 2011.